Return a metrics table — metricsTable • rPHG2

Returns a PHG metrics table by given ID

Usage

metricsTable(object, ...)

metricsTable(object, ...) <- value

# S4 method for class 'PHGMetrics'
metricsTable(object, name = NULL, type = NULL)

# S4 method for class 'PHGMetrics'
metricsTable(object) <- value

Arguments

object: an rPHG2 metrics object
...: Additional arguments, for use in specific methods
value: A named list where names are the metric table IDs and values are valid metrics tables. Currently, gVCF and AnchorWave alignment files are allowed.
name: A metric table name
type: What collection of IDs do you want to return? Defaults to NULL.