Initialize JVM and add class path

This function is needed for all PHGv2 API-related tasks (e.g., building graph objects from hVCF files or DB connections).

Usage

initPhg(phgPath, check = TRUE, verbose = TRUE)

Arguments

phgPath

Path to PHGv2 lib folder

check

Checks for latest PHGv2 release. This will need a working internet connection. Defaults to TRUE.

verbose

Should check messages be printed to console? Defaults to TRUE